Alternative Symbols
- HTR1C [HGNC]
- 5-HT2C [HGNC]
- 5HTR2C [HGNC]
Alternative Names
- 5-hydroxytryptamine (serotonin) receptor 2C [SNPedia, HGNC]
- 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled [HGNC]
SNPs
| rsID | SNPedia | dbSNP | Chips | Special Name | Wild (plus) | Risk (plus) | Frequency | PubMed IDs |
|---|---|---|---|---|---|---|---|---|
| rs1414334 |  | | A45 | CC | GG | C=0.232934 | 19142101 20680028 21186965 21105285 17016522 17632216 | |
| rs73222944 | | A45 | GG | AA | A=0.052513 | |||
| rs518147 | | | A45 | CC | C=0.339824 | 19434072 19416518 17016522 17632216 18081710 19142101 20060656 20415561 21391883 22914617 30074224 | ||
| rs3813929 | | | A45 | CC | TT | T=0.120883 | 19434072 20065966 19416518 19690620 20092861 20562674 20680028 20504252 21510767 17016522 17291373 17632216 18081710 18802918 19142101 19359258 20060656 21162693 21391883 23499153 22914617 30074224 | |
| rs3813928 | | | A45 | GG | AA | A=0.120875 | 19997080 20504252 15717931 17016522 17632216 | |
| rs12846241 | | A45 | TT | GG | G=0.188511 | |||
| rs10875535 | | A45 | TT | CC | C=0.041030 | |||
| rs73222961 | | A5 | AA | GG | G=0.109351 | |||
| rs6644093 | | A4 | TT | T=0.119139 | ||||
| rs62593092 | | A5 | TT | CC | C=0.099906 | |||
| rs5988087 | | A4 | TT | T=0.167479 | ||||
| rs5946203 | | A5 | GG | AA | G=0.232647 | |||
| rs5946005 | | A4 | GG | AA | G=0.113287 | |||
| rs556677 | | A4 | TT | T=0.207306 | ||||
| rs543229 | | A4 | GG | AA | G=0.207417 | |||
| rs539748 | | A5 | CC | TT | C=0.195105 | |||
| rs521018 | | | A5 | GG | G=0.341544 | 21185157 | ||
| rs498207 | | | A4 | GG | AA | G=0.341576 | 20504252 | |
| rs4911871 | | A4 | AA | GG | G=0.150054 | |||
| rs4911805 | | A4 | AA | A=0.021518 | ||||
| rs4338289 | | A4 | GG | AA | A=0.077098 | |||
| rs4332303 | | A4 | TT | CC | T=0.211049 | |||
| rs4272555 | | | A5 | TT | CC | T=0.232623 | 28260903 | |
| rs2497538 | | A5 | AA | CC | A=0.21108 | |||
| rs2497505 | | A5 | TT | GG | T=0.231739 | |||
| rs2428720 | | A5 | CC | C=0.24200 | ||||
| rs2428702 | | A5 | AA | GG | A=0.147219 | |||
| rs2428700 | | A5 | AA | GG | A=0.140362 | |||
| rs2228669 | | A4 | CC | GG | ||||
| rs199880850 | | A5 | AA | GG | G=0.000066 | |||
| rs1801412 | | A4 | TT | GG | G=0.043968 | |||
| rs17260600 | | A4 | CC | C=0.043387 | ||||
| rs150387861 | | A4 | GG | AA | A=0.044940 | |||
| rs148629741 | | A4 | AA | GG | G=0.009238 | |||
| rs146408614 | | A5 | CC | AA | A=0.016597 | |||
| rs143538856 | | A4 | TT | GG | G=0.008322 | |||
| rs141210748 | | A5 | GG | TT | T=0.015147 | |||
| rs12858300 | | A5 | GG | CC | C=0.039094 | |||
| rs12855702 | | A5 | CC | AA | C=0.347740 | |||
| rs12844109 | | A5 | AA | GG | G=0.147187 | |||
| rs12690355 | | A4 | AA | GG | G=0.126975 | |||
| rs11167436 | | A4 | AA | CC | A=0.20505 | |||
| rs1029975 | | A4 | AA | CC | C=0.021662 | |||
| rs6318 | | | A | GG | CC | C=0.143305 | 11526472 20494452 19997080 19193342 18332898 20071033 20092861 20504252 18715570 21614492 21967853 22764241 17192951 17964050 18081710 18802918 19032968 19359258 21162693 23221997 24386118 25514629 28260903 | |
| rs9698290 | | A | TT | T=0.338056 | ||||
| rs781854947 | | A | TT | T=0.000008 | ||||
| rs5988086 | | A | GG | G=0.222740 | ||||
| rs5988072 | | A | TT | CC | C=0.469753 | |||
| rs58482913 | | A | AA | CC | A=0.20642 | |||
| rs55733246 | | A | TT | AA | T=0.233117 | |||
| rs34890342 | | A | GG | G=0.102558 | ||||
| rs34466254 | | A | GG | G=0.039516 | ||||
| rs2497525 | | A | CC | C=0.20915 | ||||
| rs183726582 | | A | AA | GG | G=0.12972 | |||
| rs144730567 | | A | AA | A=0.013093 | ||||
| rs12560193 | | A | GG | G=0.18798 | ||||
| rs11797988 | | A | CC | AA | A=0.123662 | |||
| rs11167431 | | A | TT | GG | T=0.165607 | |||
| rs498177 | | | GG | AA | A=0.469714 | 21185157 | ||
| rs2428707 | | | TT | CC | T=0.241590 | 28260903 | ||
| rs2192372 | | | AA | A=0.340079 | 28260903 |
PubMed References
-
PMID:20065966 [rs3813929]
PMID:22764241 [rs6318]
PMID:15717931 [rs3813928]
PMID:24386118 [rs6318]
PMID:20494452 [rs6318]
PMID:20071033 [rs6318]
PMID:7895773 [HGNC]
PMID:19416518 [rs3813929,rs518147]
PMID:20504252 [rs3813928,rs3813929,rs498207,rs6318]
PMID:21186965 [rs1414334]
PMID:19032968 [rs6318]
PMID:20415561 [rs518147]
PMID:19359258 [rs3813929,rs6318]
PMID:17016522 [rs1414334,rs3813928,rs3813929,rs518147]
PMID:25514629 [rs6318]
PMID:17192951 [rs6318]
PMID:18081710 [rs3813929,rs518147,rs6318]
PMID:20562674 [rs3813929]
PMID:21162693 [rs3813929,rs6318]
PMID:19434072 [rs3813929,rs518147]
PMID:21510767 [rs3813929]
PMID:20680028 [rs1414334,rs3813929]
PMID:11526472 [rs6318]
PMID:30074224 [rs3813929,rs518147]
PMID:17964050 [rs6318]
PMID:21391883 [rs3813929,rs518147]
PMID:19142101 [rs1414334,rs3813929,rs518147]
PMID:19997080 [rs3813928,rs6318]
PMID:20092861 [rs3813929,rs6318]
PMID:23499153 [rs3813929]
PMID:21614492 [rs6318]
PMID:28260903 [rs2192372,rs2428707,rs4272555,rs6318]
PMID:21185157 [rs498177,rs521018]
PMID:20060656 [rs3813929,rs518147]
PMID:21967853 [rs6318]
PMID:19690620 [rs3813929]
PMID:18802918 [rs3813929,rs6318]
PMID:22914617 [rs3813929,rs518147]
PMID:17291373 [rs3813929]
PMID:19193342 [rs6318]
PMID:18332898 [rs6318]
PMID:18715570 [rs6318]
PMID:23221997 [rs6318]
PMID:17632216 [rs1414334,rs3813928,rs3813929,rs518147]
PMID:21105285 [rs1414334]
Other References
-
SNPedia=HTR2C
EntrezGene=3358
PheGenI=3358
ClinVar=HTR2C
GeneCards=HTR2C
Wikipedia=HTR2C
Google=HTR2C
UniProt=P28335
Ensembl=ENSG00000147246
OMIM=312861